Orthogonal effect of exchange and correlation parameters in density functional theory to compute geometric and spectroscopic quantities.

The influence of the composition of the functional used for density functional theory computations on one structural parameter (a dihedral angle) and a spectroscopic parameter (absorption wavelength) is assessed in this study on the basis of two molecules (flavonols). In this kind of molecules, these two parameters should be correlated according to the nature of the electronic transition involved. However, it is shown herein that by varying the proportion of true exchange and correlation while building a functional, it is possible to obtain independently a large range of values for these parameters without any relation with the underlying real values. Therefore, it is concluded that the choice of a functional after a benchmark, especially using user-defined functionals, should be carried out with great care to avoid such effects.

Stability of Iodine Species Trapped in Titanium-Based MOFs: MIL-125 and MIL-125_NH2.

Two titanium-based MOFs MIL-125 and MIL-125_NH2 are synthesized and characterized using high-temperature powder X-ray diffraction (PXRD), thermogravimetric analysis (TGA), N2 sorption, Fourier transformed infrared spectroscopy (FTIR), Raman spectroscopy, ultraviolet-visible spectroscopy (UV-Vis), and electron paramagnetic resonance (EPR). Stable up to 300 °C, both compounds exhibited similar specific surface areas (SSA) values (1207 and 1099 m2 g-1 for MIL-125 and MIL-125_NH2, respectively). EPR signals of Ti3+ are observed in both, whith MIL-125_NH2 also showing ─NH2 ●+ signatures. Both MOFs efficiently adsorbed iodine in continuous gas flow over five days, with MIL-125 trapping 1.9 g.g-1 and MIL-125_NH2 trapping 1.6 g.g-1. MIL-125_NH2 exhibited faster adsorption kinetics due to its smaller band gap (2.5 against 3.6 eV). In situ Raman spectroscopy conducted during iodine adsorption revealed signal evolution from "free" I2 to "perturbed" I2, and I3 -. TGA and in situ Raman desorption experiments showed that ─NH2 groups improved the stabilization of I3 - due to an electrostatic interaction with NH2 ●+BDC radicals. The Albery model indicated longer lifetimes for iodine desorption in I2@MIL-125_NH2, attributed to a rate-limiting step due to stronger interaction between the anionic iodine species and the ─NH2 ●+ radicals. This study underscores how MOFs with efficient charge separation and hole-stabilizer functional groups enhance iodine stability at higher temperatures.

New insights for titanium(iv) speciation in acidic media based on UV-visible and 31P NMR spectroscopies and molecular modeling.

Titanium chemistry in aqueous acidic media has been extensively investigated over the last decades. Hydrolyzed species such as Ti(OH)3+, TiO2+, Ti(OH)2 2+ or Ti(OH)3 + have been identified and their equilibria have been studied in nitric and perchloric acid. A predominance of the divalent cations was found for low pH (i.e., pH <2). Nonetheless, recent literature reports the existence of small titanium oxo-clusters in aqueous acidic media for large titanium(iv) concentration (typically., >0.1 mol L-1), as stable precursors for the formation of condensed titanium dioxide. The present paper reconsiders firstly previous knowledge about the speciation of titanium(iv) in non-complexing acidic media by giving evidence for the presence of polynuclear hydrolyzed species, even at very low Ti(iv) concentration (i.e., typically <0.1 mmol L-1). UV-visible absorbance spectra recorded for diluted nitric acid solutions (a model of non-complexing acidic medium) containing titanium(iv) were compared to time-dependent density functional theory (TD-DFT) predicted excitation energies. Experimental and predicted maximal absorbance wavelengths showed significantly improved matches when polynuclear species were considered in TD-DFT calculation. Then, 0.1-12.7 mol L-1 phosphoric acid solutions containing titanium(iv) were studied by means of spectroscopic techniques (UV-visible, NMR) in order to identify qualitatively the presence of titanium(iv) complexes and to link this speciation to the acid concentration. Two different titanium(iv) orthophosphate complexes, potentially polynuclear, were detected, and the presence of free titanium(iv) is also expected for low phosphoric acid concentration (i.e., <0.1 mol L-1). A general complexation scheme for a large range of H3PO4 concentration was thus formulated.

pH dependency of the structural and photophysical properties of the atypical 2',3-dihydroxyflavone.

2',3-Dihydroxyflavone (2'3HF) is a natural flavonol that has barely ever been studied, however the scarce studies of its physico-chemical properties have highlighted its atypical behaviour. We present a structural and spectral study of 2'3HF, performed using UV-visible absorption and fluorescence spectroscopies, coupled with DFT and TD-DFT calculations. Although its structure is close to that of 3-hydroxyflavone, 2'3HF shows a much lower pK a value. We show that the origin of this particularity is the substitution by a hydroxyl group on position 2', that induces a stronger inter-ring interaction weakening the bonding of the proton at position 3. The main absorption band of the is red-shifted upon deprotonation. The remaining proton is highly bonded in between oxygen atoms 3 and 2', making the second deprotonation unattainable in methanol. The neutral form can undergo an excited-state intramolecular proton transfer to emit dual fluorescence by the normal and tautomer forms. We suggested five geometries to be the sources of the emission bands, and showed that the energy barriers to interconversions were almost null. The anion is also fluorescent. The Stokes shifts for the neutral normal and anion species are extremely high, that can be explained by the conformational rearrangement, as the species go from twisted in the ground-state, to planar in the excited-state. Finally, another emission band is evidenced when exciting in the vicinity of the absorption maximum of the anion species in acidic medium. We suggest an aggregate with the solvent to be the origin of the emission.

Spectroscopic and theoretical study of the pH effect on the optical properties of the calcium-morin system.

Morin (2-(2,4-dihydroxyphenyl)-3,5,7-trihydroxychromen-4-one) is an abundant flavonoid with various pharmacological and biological activities. Considering the ubiquitous presence of calcium cations in biological systems, it seems relevant to study the interaction of this ion with morin and the influence of pH on this system. In a first step, among the four hypothetical chelation sites, the preferential fixing site, its protonation state and the Ca environment have been determined by combining electronic spectroscopies and density functional theory (DFT) and time-dependent DFT calculations. Then, using the same methodology, the fate of the formed complex with the variation of pH was studied. Calcium chelation occurs with the 3-hydroxy-4-keto site with deprotonation of the hydroxyl group. The coordination number of CaII does not seem to be a determining parameter insofar whatever the number of solvent molecules present in the coordination sphere of the metal, the calculation of the electronic transitions leads to the same results. With the increase in pH, a first deprotonation of the complex occurs at the level of a solvent molecule in the metal coordination sphere, followed by a deprotonation of the hydroxyl function in position 7.

Electronic Spectroscopies Combined with Quantum Chemistry Calculations: Study of the Interactions of 3-Hydroxyflavone with Copper Ions.

The current study aims at obtaining a better understanding of the mechanisms involved in the complexation of copper ions by 3-hydroxyflavone (3HF), which is one of the most studied compounds of the flavonoid family. To achieve this goal, quantum chemistry calculations combined with electronic spectroscopies, including absorption, fluorescence emission, and excitation, have been used. The formation of successive complexes of stoichiometry (metal/ligand) 1:2, 1:1, and 3:2 has been highlighted. Even under acidic conditions (pH = 4.0), the α-hydroxy-keto function of the molecule presents a high complexing power with regard to copper ions, insofar as a stable complex of 1:2 stoichiometry is obtained with a large conditional stability constant (log ß = 8.7). The formation of this predominant species induces a quenching of the dual fluorescence of 3HF, whereas the second complex of stoichiometry 1:1 presents a fluorescence emission.

Visible light-triggered fluorescence and pH modulation using metastable-state photoacids and BODIPY.

Small changes in the pH gradient play a critical role in numerous biological and chemical pathways. Systems capable of monitoring and regulating these changes with high sensitivity and minimum photo-fatigue are in demand. Herein, we propose a visible light-triggered molecular system that allows for reversible regulation of acidity and fluorescence. This robust bi-functional system opens a new horizon towards novel studies that rely on small changes in acid-mediated controlled processes with high sensitivity. The two photosensitive compounds employed, a metastable-state photoacid (mPAH) and a boron-dipyrromethene (BODIPY) derivative, allow for consistent modulation of both fluorescence (based on the working principle of the inner filter effect) and pH (around a magnitude) over multiple cycles.

Chalcogen substitution: Effect of oxygen-by-sulfur exchange on structural and spectroscopic properties of flavonols.

Quantum chemical calculations using density functional theory have revealed that the substitution of the ketone group by a thioketone one doesn't significantly change the structure of 3-hydroxyflavone. Notably, the strong intramolecular hydrogen bond involving the hydroxyl function is preserved if the O atom is substituted by an S atom, but also by Se or Te atoms. However, fundamental modifications are observed in both absorption and emission electronic spectra upon substitution, particularly the non-fluorescent behavior of the flavothione. All these changes were explained by the optimizations of the different excited states carried out by time-dependent DFT method.

A quantum chemistry evaluation of the stereochemical activity of the lone pair in PbII complexes with sequestering ligands.

The stereochemical activity of the lone pair on PbII complexes is assessed using several theoretical methods, including structural analyses, computations of Fukui functions, natural bond orbitals, electron localization function, investigation of the electron density and of its laplacian. The attention is focused on four octadentate N-carbamoylmethyl-substituted tetraazamacrocycles of various ring sizes ranging from 8 to 14 atoms associated with the PbII cation. The theoretical study illustrates the geometrical constraints imposed by the ring structure which limits the spatial development of the lone pair but without fully preventing it. For a given coordination number, the lone pair activity is strongly correlated to the geometry of the ligand and in particular to the size of the cage that the ligand forms around the PbII cation. Some limitations of the theoretical tools used are also evidenced, among them the necessity to sample around a critical point instead of just analyzing its nature. In the case of the laplacian of the electron density, a visualization method is introduced to moderate the results based only on the nature of a critical point. These limitations should also be related to the difficulty to extend the lone pair concept for the heaviest atoms of the classification.

Direct Carboxylation of Aryl Tosylates by CO2 Catalyzed by In situ-Generated Ni(0).

A novel Ni(0) -catalyzed carboxylation of aryl tosylates with carbon dioxide has been achieved under moderate temperatures and atmospheric pressure. In this procedure, the active Ni(0) species is generated in situ by simply mixing the Ni(0) precatalyst [NiBr2 (bipy)] with an excess of manganese metal. This approach requires neither a glove-box nor the tedious preparation of sophisticated intermediate organometallic derivatives. This mild, convenient, and user-friendly process is successfully applied to the valorization of carbon dioxide and the synthesis of versatile reactants with broad tolerance of substituents.

Conformational and structural studies of N-methylacetohydroxamic acid and of its mono- and bis-chelated uranium(VI) complexes.

The thermodynamics and kinetics of the cis/trans isomerism of N-methylacetohydroxamic acid (NMAH) and its conjugated base (NMA(-)) have been reinvestigated in aqueous media by (1)H NMR spectroscopy. Hindered rotation around the central C-N bond due to electronic delocalization becomes slow enough on the NMR time scale to observe both rotamers in equilibrium in D2O at room temperature. By properly assigning the methyl group resonances, evidence for the prevalence of the E over the Z form is unambiguously provided [K300=[E]/[Z]=2.86(2) and 9.63(5) for NMAH and NMA(-), respectively], closing thereby a long-lasting dispute about the most stable conformer. To that end, calculations of the chemical shifts by density functional theory (DFT), which accurately reproduced the experimental data, turned out to be a much more reliable method than the direct computation of the relative energy for each conformer. The Z ⇌ E interconversion dynamics was probed at 300 K in D2O by 2D exchange-correlated spectroscopy (EXSY), affording the associated rate constants [kZE=9.0(2) s(-1) and kEZ=3.14(5) s(-1) for NMAH, kZE=0.96(3) s(-1) and kEZ=0.10(2) s(-1) for NMA(-)] and activation barriers at 300 K [ΔG(≠)ZE=68.0 kJ mol(-1) and ΔG(≠)EZ=70.6 kJ mol(-1) for NMAH, ΔG(≠)ZE=73.6 kJ mol(-1) and ΔG(≠)EZ=79.2 kJ mol(-1) for NMA(-)]. For the first time, mono- and bis-chelated uranium(VI) complexes of NMA(-) have been isolated. Crystals of [UO2(NMA)(NO3)(H2O)2] and [UO2(NMA)2(H2O)] have been characterized by X-ray diffractometry, infrared and Raman spectroscopies.

Enantioselective organocatalytic partial transfer hydrogenation of lactone-fused quinolines.

The first enantioselective synthesis of 4-aza-podophyllotoxin derivatives by partial transfer hydrogenation of lactone-fused quinolines was achieved using a chiral Brønsted acid catalyst. This reaction was extended to a large scope of substrates with good yields and enantioselectivities.

The complexation of AlIII, PbII, and CuII metal ions by esculetin: a spectroscopic and theoretical approach.

UV-visible absorption spectroscopy combined with quantum chemical calculations and, notably, Time-Dependent Density Functional Theory were used to probe the structure of metal complexes with esculetin in dilute aqueous solution, at pH = 5. For the 1:1 complex formation, the studied metal ions can be classified according to their complexing power: aluminum(III) > copper(II) > lead(II). For the three complexes, a chelate is formed with the fully deprotonated catechol moiety and an absorption band is observed at the same wavelength. In all cases, a pronounced ionic character is calculated for metal-ligand bonds. However, the complexes differ in their coordination sphere. Copper and lead are bound to two water molecules leading to a square plane geometry and a hemidirected complex, respectively, whereas aluminum atom has an octahedral environment involving three water molecules and a hydroxide ion. For Al(III) only, a 2:1 complex is observed, and the involvement of an aluminum dimer was evidenced.

Enhancement of the water solubility of flavone glycosides by disruption of molecular planarity of the aglycone moiety.

Enhancement of the water solubility by disruption of molecular planarity has recently been reviewed as a feasible approach in small-molecule drug discovery programs. We applied this strategy to some natural flavone glycosides, especially diosmin, a highly insoluble citroflavonoid prescribed as an oral phlebotropic drug. Disruption of planarity at the aglycone moiety by 3-bromination or chlorination afforded 3-bromo- and 3-chlorodiosmin, displaying a dramatic solubility increase compared with the parent compound.

Cobalt-catalyzed vinylation of aromatic halides using ß-halostyrene: experimental and DFT studies.

A new protocol for the direct cobalt-catalyzed vinylation of aryl halides using ß-halostyrene has been developed in order to form functionalized stilbenes. A variety of aromatic halides featuring different reactive group were employed. This method proceeded smoothly with a total retention of the double bond configuration in the presence of triphenylphosphine as ligand. Preliminary DFT calculations rationalize these results and proposed a reaction pathway in agreement with the experimental conditions. This procedure offers a new route to the stereoselective synthesis of stilbenes.

Theoretical study of absorption and emission properties of green and yellow emitting iridium(III) complexes.

Iridium(III) complexes are among the most used phosphorescent materials for the development of organic light emitting diodes (OLEDs). In this work, the photophysical properties of a family of complexes based on phenyldiazine ligands were studied. Their ground state geometric and electronic structures as well as their absorption and emission spectra were investigated by the means of density functional theory (DFT) and time-dependent DFT (TD-DFT). An extremely good agreement between the computed and experimental values is obtained, thus suggesting that the computational protocol here applied could be used for the in silico screening and design of new Ir-based emitting complexes.

Cobalt-catalyzed formation of symmetrical biaryls and its mechanism.

Effective devotion: An efficient cobalt-catalyzed method devoted to the formation of symmetrical biaryls is described avoiding the preparation of organometallic reagents. Various aromatic halides functionalized by a variety of reactive group reagents are employed. Preliminary DFT calculations have shown that the involvement of a Co(I)/Co(III) couple is realistic at least in the case of 1,3-diazadienes as ligands (FG = functional group).

Cobalt-catalyzed cross-coupling reactions.

In the last few years, we and other groups have demonstrated that economical cobalt salts can advantageously replace expensive and toxic catalysts for cross coupling reactions. These cobalt-catalyzed reactions have considerably extended the range of functionalized compounds. A variety of sensitive functional groups can be tolerated in these coupling reactions and various organic compounds RX could be involved (R = alkyl, alkynyl, aryl, allyl and X = halides: F, Cl, Br, I and even triflates). Here, we describe our contributions in this area for the preparation of a broad range of functionalized compounds from organometallic species or by direct cross-coupling.